1RBQ Transferase date Nov 03, 2003
title Human Gar Tfase Complex Structure With 10-(Trifluoroacetyl)- Dideazaacyclic-5,6,7,8-Tetrahydrofolic Acid
authors Y.Zhang, J.Desharnais, D.L.Boger, I.A.Wilson
compound source
Molecule: Phosphoribosylglycinamide Formyltransferase
Chain: A, B, C, D
Fragment: (Residues 808-1010)
Synonym: Gart; Gar Transformylase; 5'-Phosphoribosylglycina Transformylase;
Ec: 2.1.2.2
Engineered: Yes
Other_details: Part Of Trifunctional Purine Biosynthetic Pr Adenosine-3
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Purn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22a
symmetry Space Group: P 31
R_factor 0.245 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.594 126.594 94.740 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand KEU, PO4 enzyme Transferase E.C.2.1.2.2 BRENDA
related structures by homologous chain: 1RBY, 1RBZ
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (261 Kb) [Save to disk]
  • Biological Unit Coordinates (1rbq.pdb1.gz) 66 Kb
  • Biological Unit Coordinates (1rbq.pdb2.gz) 66 Kb
  • Biological Unit Coordinates (1rbq.pdb3.gz) 66 Kb
  • Biological Unit Coordinates (1rbq.pdb4.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1RBQ
  • CSU: Contacts of Structural Units for 1RBQ
  • Likely Quarternary Molecular Structure file(s) for 1RBQ
  • Structure Factors (763 Kb)
  • Retrieve 1RBQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RBQ from S2C, [Save to disk]
  • Re-refined 1rbq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RBQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RBQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RBQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rbq_A] [1rbq_C] [1rbq_B] [1rbq_D] [1rbq]
  • SWISS-PROT database: [P22102]
  • Domain organization of [PUR2_HUMAN] by SWISSPFAM
  • Other resources with information on 1RBQ
  • Community annotation for 1RBQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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