| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (47 Kb) [Save to disk]
 - Biological Unit Coordinates (1rdn.pdb1.gz) 42 Kb
- LPC: Ligand-Protein Contacts for 1RDN
- CSU: Contacts of Structural Units for 1RDN
- Likely Quarternary Molecular Structure file(s) for 1RDN
- Structure Factors (170 Kb)
- Retrieve 1RDN in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1RDN
from S2C,
[Save to disk]
- Re-refined 1rdn structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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| View 1RDN in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
|
| Visual 3D analysis of 1RDN |
- Ramachandran
plot from PDBSum
|
| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 1RDN,
from MSDmotif at EBI
- Genome occurence of
1RDN's fold
from GeneCensus
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1rdn1_, region 1
[Jmol]
[rasmolscript]
[script source]
- Domain d1rdn2_, region 2
[Jmol]
[rasmolscript]
[script source]
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1rdn] [1rdn_1] [1rdn_2]
- SWISS-PROT database: [P08661]
- Domain organization of [MBL2_RAT] by SWISSPFAM
- Domain found in 1RDN: [CLECT
] by SMART
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|
Other resources with information on 1RDN |
- Community annotation for 1RDN at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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