1REU Hormone Growth Factor date Nov 07, 2003
title Structure Of The Bone Morphogenetic Protein 2 Mutant L51p
authors S.Keller, J.Nickel, J.L.Zhang, W.Sebald, T.D.Mueller
compound source
Molecule: Bone Morphogenetic Protein 2
Chain: A
Fragment: Mature Part
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pn25c109
symmetry Space Group: H 3 2
R_factor 0.215 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.292 94.292 102.882 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.65 Å
ligand MPD enzyme
related structures by homologous chain: 1REW, 3BMP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular recognition of BMP-2 and BMP receptor IA., Keller S, Nickel J, Zhang JL, Sebald W, Mueller TD, Nat Struct Mol Biol 2004 May;11(5):481-8. Epub 2004 Apr 4. PMID:15064755
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1reu.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (1reu.pdb2.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 1REU
  • CSU: Contacts of Structural Units for 1REU
  • Likely Quarternary Molecular Structure file(s) for 1REU
  • Structure Factors (49 Kb)
  • Retrieve 1REU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1REU from S2C, [Save to disk]
  • Re-refined 1reu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1REU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1REU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1REU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1reua_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1reu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1reu_A] [1reu]
  • SWISS-PROT database: [P12643]
  • Domain organization of [BMP2_HUMAN] by SWISSPFAM
  • Domain found in 1REU: [TGFB ] by SMART
  • Other resources with information on 1REU
  • Community annotation for 1REU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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