1RFE Structural Genomics, Unknown Function date Nov 08, 2003
title Crystal Structure Of Conserved Hypothetical Protein Rv2991 F Mycobacterium Tuberculosis
authors S.Benini, A.Haouz, F.Proux, J.M.Betton, P.Alzari, G.G.Dodson, K.S. Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Hypothetical Protein Rv2991
Chain: A
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83332
Strain: H37rv
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest17
symmetry Space Group: P 43 2 2
R_factor 0.202 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.309 49.309 132.588 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CSX, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • oxidoreductase activity, act...


    • Primary referenceThe crystal structure of Rv2991 from Mycobacterium tuberculosis: An F420 binding protein with unknown function., Benini S, Haouz A, Proux F, Alzari P, Wilson K, J Struct Biol. 2019 Mar 16. pii: S1047-8477(19)30051-6. doi:, 10.1016/j.jsb.2019.03.006. PMID:30890426
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1rfe.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1RFE
  • CSU: Contacts of Structural Units for 1RFE
  • Likely Quarternary Molecular Structure file(s) for 1RFE
  • Structure Factors (148 Kb)
  • Retrieve 1RFE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RFE from S2C, [Save to disk]
  • Re-refined 1rfe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1RFE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RFE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RFE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rfea_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rfe] [1rfe_A]
  • SWISS-PROT database: [O53240]
  • Domain organization of [O53240_MYCTU] by SWISSPFAM
    • Other resources with information on 1RFE
  • Community annotation for 1RFE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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