1RH7 Hormone Growth Factor date Nov 13, 2003
title Crystal Structure Of Resistin-Like Beta
authors S.D.Patel, M.W.Rajala, P.E.Scherer, L.Shapiro, S.K.Burley, New Yo Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Resistin-Like Beta
Chain: A, B, C, D, E, F
Synonym: Relmbeta; Cysteine-Rich Secreted Protein Fizz2; Cy Rich Secreted Protein A12-Beta;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Retnlb Or Fizz2
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfm1
symmetry Space Group: I 2 2 2
R_factor 0.201 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.604 86.016 283.406 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.11 Å
ligand P6G, PT enzyme
note 1RH7 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • hormone activity


  • Primary referenceDisulfide-dependent multimeric assembly of resistin family hormones., Patel SD, Rajala MW, Rossetti L, Scherer PE, Shapiro L, Science 2004 May 21;304(5674):1154-8. PMID:15155948
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (1rh7.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (1rh7.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (1rh7.pdb3.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 1RH7
  • CSU: Contacts of Structural Units for 1RH7
  • Likely Quarternary Molecular Structure file(s) for 1RH7
  • Structure Factors (111 Kb)
  • Retrieve 1RH7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RH7 from S2C, [Save to disk]
  • Re-refined 1rh7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RH7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RH7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RH7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rh7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1rh7b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1rh7c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1rh7d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1rh7e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1rh7f_, region F [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rh7_E] [1rh7] [1rh7_F] [1rh7_A] [1rh7_C] [1rh7_B] [1rh7_D]
  • SWISS-PROT database: [Q99P86]
  • Domain organization of [RETNB_MOUSE] by SWISSPFAM
  • Other resources with information on 1RH7
  • Community annotation for 1RH7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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