1RII	Isomerase	date	Nov 17, 2003
title	Crystal Structure Of Phosphoglycerate Mutase From M. Tubercu
authors	P.Mueller, M.R.Sawaya, S.Chan, Y.Wu, I.Pashkova, J.Perry, D.Eisenb Structural Genomics Consortium (Tbsgc)
compound		source
Molecule: 2,3-Bisphosphoglycerate-Dependent Phosphoglycerat Chain: A, B, C, D Synonym: Phosphoglyceromutase, Pgam, Bpg-Dependent Pgam, Dp Ec: 5.4.2.1 Engineered: Yes		Organism_scientific: Mycobacterium Tuberculosis Organism_taxid: 1773 Gene: Gpma, Gpm, Pgm, Gpm1, Rv0489, Mt0508, Mtcy20g9.15, Mb Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Gold (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
symmetry	Space Group: P 1 21 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.914 136.790 65.929 90.00 97.78 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	GOL	enzyme	Isomerase E.C.5.4.2.1 BRENDA
related structures	by homologous chain: 1QHF, 5PGM
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The 1.70 angstroms X-ray crystal structure of Mycobacterium tuberculosis phosphoglycerate mutase., Muller P, Sawaya MR, Pashkov I, Chan S, Nguyen C, Wu Y, Perry LJ, Eisenberg D, Acta Crystallogr D Biol Crystallogr 2005 Mar;61(Pt 3):309-15. Epub 2005, Feb 24. PMID:15735341

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk] Biological Unit Coordinates (1rii.pdb1.gz) 155 Kb LPC: Ligand-Protein Contacts for 1RII CSU: Contacts of Structural Units for 1RII Likely Quarternary Molecular Structure file(s) for 1RII Structure Factors (1091 Kb) Retrieve 1RII in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RII from S2C, [Save to disk] Re-refined 1rii structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RII in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RII

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RII, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1riia_, region A [Jmol] [rasmolscript] [script source]     - Domain d1riib_, region B [Jmol] [rasmolscript] [script source]     - Domain d1riic_, region C [Jmol] [rasmolscript] [script source]     - Domain d1riid_, region D [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rii_B] [1rii_C] [1rii_A] [1rii_D] [1rii] SWISS-PROT database: [P0A5R6] Domain organization of [GPMA_MYCTU] by SWISSPFAM Domain found in 1RII: [PGAM ] by SMART

Other resources with information on 1RII

Community annotation for 1RII at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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