1RIN Lectin date Jan 27, 1993
title X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex Angstroms Resolution
authors J.M.Rini, K.D.Hardman, H.Einspahr, F.L.Suddath, J.P.Carver
compound source
Molecule: Pea Lectin
Chain: A, C
Engineered: Yes
Organism_scientific: Pisum Sativum
Organism_common: Pea
Organism_taxid: 3888

Molecule: Pea Lectin
Chain: B, D
Engineered: Yes

Organism_scientific: Pisum Sativum
Organism_common: Pea
Organism_taxid: 3888
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.300 73.400 108.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand CA, MAN, MN enzyme
related structures by homologous chain: 1LGC, 1LOF, 1SBD, 2SBA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceX-ray crystal structure of a pea lectin-trimannoside complex at 2.6 A resolution., Rini JM, Hardman KD, Einspahr H, Suddath FL, Carver JP, J Biol Chem 1993 May 15;268(14):10126-32. PMID:8486683
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1rin.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (1rin.pdb2.gz) 38 Kb
  • Biological Unit Coordinates (1rin.pdb3.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1RIN
  • CSU: Contacts of Structural Units for 1RIN
  • Likely Quarternary Molecular Structure file(s) for 1RIN
  • Retrieve 1RIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RIN from S2C, [Save to disk]
  • View 1RIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RIN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RIN, from MSDmotif at EBI
  • Genome occurence of 1RIN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rin.1, region A:,B [Jmol] [rasmolscript] [script source]
        - Domain d1rin.2, region C:,D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rin_D] [1rin_A] [1rin_B] [1rin] [1rin_C]
  • SWISS-PROT database: [P02867]
  • Domain organization of [LEC_PEA] by SWISSPFAM
  • Other resources with information on 1RIN
  • Community annotation for 1RIN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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