1RIS Ribosomal Protein date May 31, 1994
title Crystal Structure Of The Ribosomal Protein S6 From Thermus Thermophilus
authors M.Lindahl, L.A.Svensson, A.Liljas, S.E.Sedelnikova, I.A.Eliseiki N.P.Fomenkova, N.Nevskaya, S.V.Nikonov, M.B.Garber, T.A.Muranov A.I.Rykonova, R.Amons
compound source
Molecule: Ribosomal Protein S6
Chain: A
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
symmetry Space Group: C 2 2 2
R_factor 0.183 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.810 52.720 41.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1CQN, 1LOU
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the ribosomal protein S6 from Thermus thermophilus., Lindahl M, Svensson LA, Liljas A, Sedelnikova SE, Eliseikina IA, Fomenkova NP, Nevskaya N, Nikonov SV, Garber MB, Muranova TA, et al., EMBO J 1994 Mar 15;13(6):1249-54. PMID:8137808
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (1ris.pdb1.gz) 67 Kb
  • CSU: Contacts of Structural Units for 1RIS
  • Likely Quarternary Molecular Structure file(s) for 1RIS
  • Retrieve 1RIS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RIS from S2C, [Save to disk]
  • View 1RIS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RIS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RIS, from MSDmotif at EBI
  • Genome occurence of 1RIS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ris__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ris_A] [1ris]
  • SWISS-PROT database: [P23370]
  • Domain organization of [RS6_THETH] by SWISSPFAM
  • Other resources with information on 1RIS
  • Community annotation for 1RIS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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