1RLP Complex (Signal Transduction Peptide) date Oct 10, 1994
title Two Binding Orientations For Peptides To Src Sh3 Domain: Dev Of A General Model For Sh3-Ligand Interactions
authors S.Feng, J.K.Chen, H.Yu, J.A.Simon, S.L.Schreiber
compound source
Molecule: C-Src Tyrosine Kinase Sh3 Domain
Chain: C
Engineered: Yes
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Synthetic Oligo
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pgex-2t Gene: Synthetic Oligo

Molecule: Proline-Rich Ligand Rlp2 (Ralpplpry)
Chain: R
Engineered: Yes
methodSolution NMR
Primary referenceTwo binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions., Feng S, Chen JK, Yu H, Simon JA, Schreiber SL, Science 1994 Nov 18;266(5188):1241-7. PMID:7526465
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk]
  • Biological Unit Coordinates (1rlp.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 1RLP
  • Original NMR restraints for 1RLP from PDB
  • Retrieve 1RLP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RLP from S2C, [Save to disk]
    • View 1RLP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RLP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RLP, from MSDmotif at EBI
  • Genome occurence of 1RLP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rlpc_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rlp] [1rlp_C] [1rlp_R]
  • SWISS-PROT database: [P00523]
  • Domain organization of [SRC_CHICK] by SWISSPFAM
  • Domain found in 1RLP: [SH3 ] by SMART
    • Other resources with information on 1RLP
  • Community annotation for 1RLP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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