1RSS Ribosomal Protein date Aug 05, 1997
title Ribosomal Protein S7 From Thermus Thermophilus
authors B.Wimberly, S.White, V.Ramakrishnan
compound source
Molecule: Ribosomal Protein S7
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
Cell_line: Bl21
Gene: S7
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-13a
Expression_system_gene: S7
symmetry Space Group: P 43 21 2
R_factor 0.229 R_Free 0.284
length a length b length c angle alpha angle beta angle gamma
55.530 55.530 103.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
note 1RSS is a representative structure
related structures by homologous chain: 1FJG

Primary referenceThe structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids., Wimberly BT, White SW, Ramakrishnan V, Structure 1997 Sep 15;5(9):1187-98. PMID:9331418
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (1rss.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1RSS
  • Likely Quarternary Molecular Structure file(s) for 1RSS
  • Structure Factors (93 Kb)
  • Retrieve 1RSS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RSS from S2C, [Save to disk]
  • Re-refined 1rss structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RSS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RSS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RSS, from MSDmotif at EBI
  • Genome occurence of 1RSS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rss__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rss] [1rss_A]
  • SWISS-PROT database: [P17291]
  • Domain organization of [RS7_THET8] by SWISSPFAM
  • Other resources with information on 1RSS
  • Community annotation for 1RSS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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