1RT1	Nucleotidyltransferase	date	Mar 16, 1996
title	Crystal Structure Of Hiv-1 Reverse Transcriptase Complexed W 442
authors	J.Ren, R.Esnouf, A.Hopkins, B.Willcox, Y.Jones, C.Ross, D.Stammers
compound		source
Molecule: Hiv-1 Reverse Transcriptase Chain: A Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Strain: Hxb2 Isolate Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
Molecule: Hiv-1 Reverse Transcriptase Chain: B Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Strain: Hxb2 Isolate Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
symmetry	Space Group: P 21 21 21	R_factor 0.197 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 136.800 109.800 72.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.55 Å
ligand	CSD, MKC BindingDB	enzyme	Transferase E.C.2.7.7.49 BRENDA
related structures	by homologous chain: 1C0U, 1RT2
Gene Ontology	Chain Function Process Component A B
Primary reference	Complexes of HIV-1 reverse transcriptase with inhibitors of the HEPT series reveal conformational changes relevant to the design of potent non-nucleoside inhibitors., Hopkins AL, Ren J, Esnouf RM, Willcox BE, Jones EY, Ross C, Miyasaka T, Walker RT, Tanaka H, Stammers DK, Stuart DI, J Med Chem 1996 Apr 12;39(8):1589-600. PMID:8648598

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk] Biological Unit Coordinates (1rt1.pdb1.gz) 165 Kb LPC: Ligand-Protein Contacts for 1RT1 CSU: Contacts of Structural Units for 1RT1 Likely Quarternary Molecular Structure file(s) for 1RT1 Retrieve 1RT1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RT1 from S2C, [Save to disk]

View 1RT1 in 3D

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Visual 3D analysis of 1RT1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RT1, from MSDmotif at EBI Genome occurence of 1RT1's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rt1a2, region A:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1rt1a1, region A:430-539 [Jmol] [rasmolscript] [script source]     - Domain d1rt1b1, region B:6-431 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rt1] [1rt1_A] [1rt1_B] SWISS-PROT database: [P04585] Domain organization of [POL_HV1H2] by SWISSPFAM

Other resources with information on 1RT1

Community annotation for 1RT1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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