1RWJ Electron Transport date Dec 16, 2003
title C7-Type Three-Heme Cytochrome Domain
authors P.R.Pokkuluri, Y.Y.Londer, N.E.C.Duke, J.Erickson, M.Pessanha, C.A.Salgueiro, M.Schiffer
compound source
Molecule: Cytochrome C Family Protein
Chain: A
Fragment: Domain C
Engineered: Yes
 Organism_scientific: Geobacter Sulfurreducens
Organism_taxid: 35554
Gene: Orf03300
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.195 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.800 43.800 123.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand HEC enzyme
note 1RWJ is a representative structure
Primary referenceStructure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer., Pokkuluri PR, Londer YY, Duke NE, Erickson J, Pessanha M, Salgueiro CA, Schiffer M, Protein Sci 2004 Jun;13(6):1684-92. Epub 2004 May 7. PMID:15133162
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1rwj.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 1RWJ
  • CSU: Contacts of Structural Units for 1RWJ
  • Likely Quarternary Molecular Structure file(s) for 1RWJ
  • Structure Factors (373 Kb)
  • Retrieve 1RWJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RWJ from S2C, [Save to disk]
  • Re-refined 1rwj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1RWJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RWJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RWJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rwja_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rwj] [1rwj_A]
  • SWISS-PROT database: [Q74BP5]
  • Domain organization of [Q74BP5_GEOSL] by SWISSPFAM
    • Other resources with information on 1RWJ
  • Community annotation for 1RWJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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