1RXT Transferase date Dec 18, 2003
title Crystal Structure Of Human Myristoyl-Coa:Protein N- Myristoyltransferase.
authors J.Yang, Y.Wang, G.Frey, R.H.Abeles, G.A.Petsko, D.Ringe
compound source
Molecule: Glycylpeptide N-Tetradecanoyltransferase 1
Chain: A, B, C, D
Fragment: Catalytic Domain
Synonym: Peptide N-Myristoyltransferase 1; Myristoyl-Coa:Pr Myristoyltransferase 1; Nmt 1; Type I N-Myristoyltransferas
Ec: 2.3.1.97
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1 21 1
R_factor 0.283 R_Free 0.391
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.626 116.425 90.361 90.00 90.13 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand CO, SO4 enzyme Transferase E.C.2.3.1.97 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • positive regulation of prote...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (1rxt.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (1rxt.pdb2.gz) 55 Kb
  • Biological Unit Coordinates (1rxt.pdb3.gz) 53 Kb
  • Biological Unit Coordinates (1rxt.pdb4.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1RXT
  • CSU: Contacts of Structural Units for 1RXT
  • Likely Quarternary Molecular Structure file(s) for 1RXT
  • Structure Factors (264 Kb)
  • Retrieve 1RXT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RXT from S2C, [Save to disk]
  • Re-refined 1rxt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RXT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RXT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RXT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rxt_C] [1rxt_A] [1rxt] [1rxt_D] [1rxt_B]
  • SWISS-PROT database: [P30419]
  • Domain organization of [NMT1_HUMAN] by SWISSPFAM
  • Other resources with information on 1RXT
  • Community annotation for 1RXT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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