1S95 Hydrolase date Feb 03, 2004
title Structure Of Serinethreonine Protein Phosphatase 5
authors M.R.Swingle, R.E.Honkanen, E.M.Ciszak
compound source
Molecule: Serinethreonine Protein Phosphatase 5
Chain: A, B
Fragment: Catalytic Domain
Synonym: Pp5, Protein Phosphatase T, Pp-T, Ppt
Ec: 3.1.3.16
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppp5c, Ppp5
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmalc2e
symmetry Space Group: P 1 21 1
R_factor 0.169 R_Free 0.209
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.808 80.309 92.189 90.00 94.25 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand MN, MPD, PO4 enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for the catalytic activity of human serine/threonine protein phosphatase-5., Swingle MR, Honkanen RE, Ciszak EM, J Biol Chem 2004 Aug 6;279(32):33992-9. Epub 2004 May 23. PMID:15155720
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (1s95.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (1s95.pdb2.gz) 59 Kb
  • Biological Unit Coordinates (1s95.pdb3.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 1S95
  • CSU: Contacts of Structural Units for 1S95
  • Likely Quarternary Molecular Structure file(s) for 1S95
  • Structure Factors (669 Kb)
  • Retrieve 1S95 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1S95 from S2C, [Save to disk]
  • Re-refined 1s95 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1S95 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1S95
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1S95, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1s95a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1s95b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1s95 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1s95_B] [1s95_A] [1s95]
  • SWISS-PROT database: [P53041]
  • Domain organization of [PPP5_HUMAN] by SWISSPFAM
  • Domain found in 1S95: [PP2Ac ] by SMART
  • Other resources with information on 1S95
  • Community annotation for 1S95 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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