1SAV Calcium Phospholipid Binding date Nov 24, 1997
title Human Annexin V With Proline Substitution By Thioproline
authors F.J.Medrano, C.Minks, N.Budisa, R.Huber
compound source
Molecule: Annexin V
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: H 3
R_factor 0.186 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.600 99.600 97.040 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand CA, PRS enzyme
related structures by homologous chain: 1ANW, 1AVH
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipase inhibitor acti...


    • Primary referenceCrystal and molecular structure of human annexin V after refinement. Implications for structure, membrane binding and ion channel formation of the annexin family of proteins., Huber R, Berendes R, Burger A, Schneider M, Karshikov A, Luecke H, Romisch J, Paques E, J Mol Biol 1992 Feb 5;223(3):683-704. PMID:1311770
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1sav.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1SAV
  • CSU: Contacts of Structural Units for 1SAV
  • Likely Quarternary Molecular Structure file(s) for 1SAV
  • Retrieve 1SAV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SAV from S2C, [Save to disk]
    • View 1SAV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1SAV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SAV, from MSDmotif at EBI
  • Genome occurence of 1SAV's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sav__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sav_A] [1sav]
  • SWISS-PROT database: [P08758]
  • Belongs to the annexin (annexin) family according to TCDB.
  • Domain organization of [ANXA5_HUMAN] by SWISSPFAM
  • Domain found in 1SAV: [ANX ] by SMART
    • Other resources with information on 1SAV
  • Community annotation for 1SAV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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