1SFS Structural Genomics, Unknown Function date Feb 20, 2004
title 1.07 A Crystal Structure Of An Uncharacterized B. Stearother Protein
authors G.Minasov, J.S.Brunzelle, L.Shuvalova, S.F.Moy, F.R.Collart, W.F. Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Hypothetical Protein
Chain: A
Engineered: Yes
 Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Gene: Rbstp1166
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 21 21 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.319 70.090 74.157 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.07 Å
ligand PO4 enzyme
note 1SFS is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (1sfs.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 1SFS
  • CSU: Contacts of Structural Units for 1SFS
  • Likely Quarternary Molecular Structure file(s) for 1SFS
  • Structure Factors (1049 Kb)
  • Retrieve 1SFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SFS from S2C, [Save to disk]
  • Re-refined 1sfs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1SFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1SFS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SFS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sfsa_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sfs_A] [1sfs]
  • SWISS-PROT database: [P84136]
  • Domain organization of [P84136_BACST] by SWISSPFAM
    • Other resources with information on 1SFS
  • Community annotation for 1SFS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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