1SFW Hydrolase date Feb 23, 1996
title Porcine Pancreas Phospholipase A2, Nmr, 18 Structures
authors B.Van Den Berg, M.Tessari, R.Boelens, R.Dijkman, R.Kaptein, G.H.D H.M.Verheij
compound source
Molecule: Phospholipase A2
Chain: A
Synonym: Pla2, Phosphatidylcholine 2-Acylhydrolase
Ec: 3.1.1.4
Engineered: Yes
Other_details: This Entry Presents The Solution Structure O Enzyme In The Presence Of Lipid Micelles And A Competitive
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Organ: Pancreas
Gene: Porcine Pancreas Pla2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pab3 (Pgex T2 Derived Expression Plasmid);
Expression_system_gene: Porcine Pancreas Pla2
Other_details: Details Concerning The Expression Of The Pla Found In References Below
methodSolution NMR
ligand CA enzyme Hydrolase E.C.3.1.1.4 BRENDA
related structures by homologous chain: 1PIS, 1SFV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor., van den Berg B, Tessari M, Boelens R, Dijkman R, Kaptein R, de Haas GH, Verheij HM, J Biomol NMR 1995 Feb;5(2):110-21. PMID:7703697
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (298 Kb) [Save to disk]
  • Biological Unit Coordinates (1sfw.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 1SFW
  • CSU: Contacts of Structural Units for 1SFW
  • Retrieve 1SFW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SFW from S2C, [Save to disk]
  • View 1SFW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SFW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SFW, from MSDmotif at EBI
  • Genome occurence of 1SFW's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sfw__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sfw_A] [1sfw]
  • SWISS-PROT database: [P00592]
  • Domain organization of [PA21B_PIG] by SWISSPFAM
  • Domain found in 1SFW: [PA2c ] by SMART
  • Other resources with information on 1SFW
  • Community annotation for 1SFW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1SFW from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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