1SHA Phosphotransferase date Aug 18, 1992
title Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides
authors G.Waksman, J.Kuriyan
compound source
Molecule: V-Src Sh2 Domain
Chain: A
Engineered: Yes
Organism_scientific: Rous Sarcoma Virus
Organism_taxid: 11886

Molecule: Phosphopeptide A
Chain: B
Engineered: Yes

Organism_scientific: Rous Sarcoma Virus
Organism_taxid: 11886
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free NULL
length a length b length c angle alpha angle beta angle gamma
46.300 57.500 39.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand PTR BindingDB enzyme Transferase E.C. BRENDA
related structures by homologous chain: 1FMK, 1O4A
Primary referenceCrystal structure of the phosphotyrosine recognition domain SH2 of v-src complexed with tyrosine-phosphorylated peptides., Waksman G, Kominos D, Robertson SC, Pant N, Baltimore D, Birge RB, Cowburn D, Hanafusa H, Mayer BJ, Overduin M, et al., Nature 1992 Aug 20;358(6388):646-53. PMID:1379696
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1sha.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1SHA
  • CSU: Contacts of Structural Units for 1SHA
  • Likely Quarternary Molecular Structure file(s) for 1SHA
  • Structure Factors (110 Kb)
  • Retrieve 1SHA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SHA from S2C, [Save to disk]
  • Re-refined 1sha structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SHA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SHA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1SHA 1SHAA 1SHAB from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SHA, from MSDmotif at EBI
  • Genome occurence of 1SHA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1shaa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1sha from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sha] [1sha_A] [1sha_B]
  • SWISS-PROT database: [P00524]
  • Domain organization of [SRC_RSVSA] by SWISSPFAM
  • Domain found in 1SHA: [SH2 ] by SMART
  • Other resources with information on 1SHA
  • Community annotation for 1SHA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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