1SHT Membrane Protein date Feb 26, 2004
title Crystal Structure Of The Von Willebrand Factor A Domain Of H Capillary Morphogenesis Protein 2: An Anthrax Toxin Recepto
authors D.B.Lacy, D.J.Wigelsworth, H.M.Scobie, J.A.T.Young, R.J.Collier
compound source
Molecule: Anthrax Toxin Receptor 2
Chain: X
Fragment: Vwa Domain
Synonym: Capillary Morphogenesis Protein-2, Cmg-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Antxr2, Cmg2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21.De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t-1
symmetry Space Group: P 21 3
R_factor 0.150 R_Free 0.186
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.691 79.691 79.691 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.81 Å
ligand ACT, MG enzyme
related structures by homologous chain: 1SHU, 1T6B
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceCrystal structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: An anthrax toxin receptor., Lacy DB, Wigelsworth DJ, Scobie HM, Young JA, Collier RJ, Proc Natl Acad Sci U S A 2004 Apr 27;101(17):6367-72. Epub 2004 Apr 12. PMID:15079089
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1sht.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 1SHT
  • CSU: Contacts of Structural Units for 1SHT
  • Likely Quarternary Molecular Structure file(s) for 1SHT
  • Structure Factors (116 Kb)
  • Retrieve 1SHT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SHT from S2C, [Save to disk]
  • Re-refined 1sht structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SHT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SHT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SHT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1shtx_, region X [Jmol] [rasmolscript] [script source]
  • Fold representative 1sht from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sht] [1sht_X]
  • SWISS-PROT database: [P58335]
  • Domain organization of [ANTR2_HUMAN] by SWISSPFAM
  • Domain found in 1SHT: [VWA ] by SMART
  • Other resources with information on 1SHT
  • Community annotation for 1SHT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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