1SJ1 The 1.5 A Resolution Crystal Structure of [Fe3S4]-Ferredoxin from the hyperthermophilic Archaeon Pyrococcus furiosus date
authors Nielsen, M.S., Harris, P., Ooi, B.L., Christensen, H.E.
compound source
symmetry
R_factor
R_Free 0.22269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand F3S, NCO enzyme
note 1SJ1 is a representative structure
related structures by homologous chain: 1SIZ
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • electron transfer activity


    • Primary referenceThe 1.5 A resolution crystal structure of [Fe3S4]-ferredoxin from the hyperthermophilic archaeon Pyrococcus furiosus., Nielsen MS, Harris P, Ooi BL, Christensen HE, Biochemistry 2004 May 11;43(18):5188-94. PMID:15122884
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1sj1.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 1SJ1
  • CSU: Contacts of Structural Units for 1SJ1
  • Likely Quarternary Molecular Structure file(s) for 1SJ1
  • Structure Factors (317 Kb)
  • Retrieve 1SJ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SJ1 from S2C, [Save to disk]
  • Re-refined 1sj1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1SJ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1SJ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1SJ1 1SJ1A 1SJ1B from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SJ1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sj1a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1sj1b_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sj1_A] [1sj1_B] [1sj1]
  • SWISS-PROT database: [P29603]
  • Domain organization of [FER_PYRFU] by SWISSPFAM
    • Other resources with information on 1SJ1
  • Community annotation for 1SJ1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science