1SO0 Isomerase date Mar 12, 2004
title Crystal Structure Of Human Galactose Mutarotase Complexed Wi Galactose
authors J.B.Thoden, D.J.Timson, R.J.Reece, H.M.Holden
compound source
Molecule: Aldose 1-Epimerase
Chain: A, B, C, D
Synonym: Galactose Mutarotase
Ec: 5.1.3.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Galm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hms174(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptyb12
symmetry Space Group: P 1
R_factor 0.167 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.000 68.700 98.900 107.70 98.40 102.70
method X-Ray Diffractionresolution 2.30 Å
ligand GAL enzyme Isomerase E.C.5.1.3.3 BRENDA
related structures by homologous chain: 1SNZ
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceMolecular structure of human galactose mutarotase., Thoden JB, Timson DJ, Reece RJ, Holden HM, J Biol Chem 2004 Mar 16;. PMID:15026423
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (1so0.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (1so0.pdb2.gz) 58 Kb
  • Biological Unit Coordinates (1so0.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (1so0.pdb4.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1SO0
  • CSU: Contacts of Structural Units for 1SO0
  • Likely Quarternary Molecular Structure file(s) for 1SO0
  • Structure Factors (591 Kb)
  • Retrieve 1SO0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SO0 from S2C, [Save to disk]
  • Re-refined 1so0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SO0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SO0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SO0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1so0a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1so0b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1so0c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1so0d_, region D [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1so0_D] [1so0_C] [1so0] [1so0_B] [1so0_A]
  • SWISS-PROT database: [Q96C23]
  • Domain organization of [GALM_HUMAN] by SWISSPFAM
  • Other resources with information on 1SO0
  • Community annotation for 1SO0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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