1SR2 Transferase date Mar 22, 2004
title Solution Structure Of The Escherichia Coli Yojn Histidine- Phosphotransferase (Hpt) Domain
authors V.V.Rogov, F.Bernhard, F.Loehr, V.Doetsch
compound source
Molecule: Putative Sensor-Like Histidine Kinase Yojn
Chain: A
Fragment: C-Terminal Domain (Residues 775-890)
Ec: 2.7.3.-
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: Xl1 Blue
Gene: Yojn, B2216
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the Escherichia coli YojN histidine-phosphotransferase domain and its interaction with cognate phosphoryl receiver domains., Rogov VV, Bernhard F, Lohr F, Dotsch V, J Mol Biol 2004 Oct 29;343(4):1035-48. PMID:15476819
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (758 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1SR2
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1SR2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SR2 from S2C, [Save to disk]
  • View 1SR2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SR2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SR2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sr2a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1sr2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sr2_A] [1sr2]
  • SWISS-PROT database: [P39838]
  • Domain organization of [YOJN_ECOLI] by SWISSPFAM
  • Domain found in 1SR2: [HPT ] by SMART
  • Other resources with information on 1SR2
  • Community annotation for 1SR2 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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