1SR3 Chaperone date Mar 22, 2004
title Solution Structure Of The Heme Chaperone Ccme Of Escherichia Coli
authors E.Enggist, L.Thony-Meyer, P.Guntert, K.Pervushin
compound source
Molecule: Apo-Ccme
Chain: A
Fragment: Soluble Apo-Ccme-H6(C-Terminal Domain)
Synonym: Cytochrome C-Type Biogenesis Protein Ccme
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cellular_location: Periplasm
Gene: Ccme
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ec06
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pec415
methodSolution NMR
note 1SR3 supersedes 1LIZ
subcellular loc. Membrane localization by OPM: Bacterial Gram-negative inner membrane
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of the heme chaperone CcmE reveals a novel functional motif., Enggist E, Thony-Meyer L, Guntert P, Pervushin K, Structure (Camb) 2002 Nov;10(11):1551-7. PMID:12429096
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (602 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1SR3
  • Original NMR restraints for 1SR3 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1SR3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SR3 from S2C, [Save to disk]
  • View 1SR3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SR3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SR3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sr3a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1sr3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sr3] [1sr3_A]
  • SWISS-PROT database: [P69490]
  • Domain organization of [CCME_ECOLI] by SWISSPFAM
  • Other resources with information on 1SR3
  • Community annotation for 1SR3 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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