1SUV Metal Transport date Mar 26, 2004
title Structure Of Human Transferrin Receptor-Transferrin Complex
authors Y.Cheng, O.Zak, P.Aisen, S.C.Harrison, T.Walz
compound source
Molecule: Transferrin Receptor Protein 1
Chain: A, B
Synonym: Tfr1, Tr, Tfr, Trfr, Cd71 Antigen, T9, P90
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tfrc
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell: Ovary

Molecule: Serotransferrin, N-Lobe
Chain: C, D
Fragment: Repeat 1
Synonym: Transferrin, Siderophilin, Beta-1-Metal Binding Globulin, Pro1400;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tf
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell: Kidney

Molecule: Serotransferrin, C-Lobe
Chain: E, F
Fragment: Repeat 2
Synonym: Transferrin, Siderophilin, Beta-1-Metal Binding Globulin;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tf
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell: Kidney
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 7.50 Å
ligand CO3, FE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


F, D, C, E


Primary referenceStructure of the human transferrin receptor-transferrin complex., Cheng Y, Zak O, Aisen P, Harrison SC, Walz T, Cell 2004 Feb 20;116(4):565-76. PMID:14980223
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]
  • Biological Unit Coordinates (1suv.pdb1.gz) 413 Kb
  • LPC: Ligand-Protein Contacts for 1SUV
  • CSU: Contacts of Structural Units for 1SUV
  • Likely Quarternary Molecular Structure file(s) for 1SUV
  • Retrieve 1SUV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SUV from S2C, [Save to disk]
  • View 1SUV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SUV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SUV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1suva_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1suvb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1suvc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1suvd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1suve_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1suvf_, region F [Jmol] [rasmolscript] [script source]
  • Fold representative 1suv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1suv] [1suv_F] [1suv_B] [1suv_C] [1suv_D] [1suv_A] [1suv_E]
  • SWISS-PROT database: [P02786] [P02787]
  • Domain organization of [TFR1_HUMAN] [TRFE_HUMAN] by SWISSPFAM
  • Domain found in 1SUV: [TR_FER ] by SMART
  • Other resources with information on 1SUV
  • Community annotation for 1SUV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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