1TF6 | Transcription Dna | date | Mar 02, 1998 |
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title | Co-Crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bo 5s Ribosomal Rna Gene Internal Control Region | ||||||||||||||
authors | R.T.Nolte, R.M.Conlin, S.C.Harrison, R.S.Brown | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna (5'- D(Apcpgpgpgpcpcptpgpgptptpapgptpapc Pcptpgpgpap Tpgpgpgpapgpapcpc)-3'); Chain: B, E Fragment: Internal Promoter Region Synonym: 5s Ribosomal Rna Gene Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: Dna (5'- D(Tpgpgptpcptpcpcpcpaptpcpcpapgpgpt Papcptpapap Cpcpapgpgpcpcpcpg)-3'); Chain: C, F Fragment: Internal Promoter Region Synonym: 5s Ribosomal Rna Gene Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: Protein (Transcription Factor Iiia) Chain: A, D Fragment: Nh2-Terminal Six Fingers, Residue 1-190 Synonym: Transcription Factor Iiia Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Organ: Ovary Cell: Oocyte Organelle: Nucleus Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_cellular_location: Inclusion Body Expression_system_plasmid: Prset B Other_details: Cdna | ||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.10 Å | ||||||||||||
ligand | ZN | enzyme |
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note | 1TF6 (Molecule of the Month:pdb87) | ||||||||||||||
Primary reference | Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex., Nolte RT, Conlin RM, Harrison SC, Brown RS, Proc Natl Acad Sci U S A 1998 Mar 17;95(6):2938-43. PMID:9501194 |
Data retrieval |
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Visual 3D analysis of 1TF6 |
Structure-derived information |
- Domain d1tf6a1, region A:10-40 [Jmol] [rasmolscript] [script source] - Domain d1tf6a4, region A:101-131 [Jmol] [rasmolscript] [script source] - Domain d1tf6a5, region A:132-160 [Jmol] [rasmolscript] [script source] - Domain d1tf6a6, region A:161-188 [Jmol] [rasmolscript] [script source] - Domain d1tf6a2, region A:41-70 [Jmol] [rasmolscript] [script source] - Domain d1tf6a3, region A:71-100 [Jmol] [rasmolscript] [script source] - Domain d1tf6d4, region D:101-131 [Jmol] [rasmolscript] [script source] - Domain d1tf6d5, region D:132-160 [Jmol] [rasmolscript] [script source] - Domain d1tf6d6, region D:161-188 [Jmol] [rasmolscript] [script source] - Domain d1tf6d2, region D:41-70 [Jmol] [rasmolscript] [script source] - Domain d1tf6d1, region D:7-40 [Jmol] [rasmolscript] [script source] - Domain d1tf6d3, region D:71-100 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |