1TG6 Hydrolase date May 28, 2004
title Crystallography And Mutagenesis Point To An Essential Role F Terminus Of Human Mitochondrial Clpp
authors S.G.Kang, M.R.Maurizi, M.Thompson, T.Mueser, B.Ahvazi
compound source
Molecule: Putative Atp-Dependent Clp Protease Proteolytic S
Chain: A, B, C, D, E, F, G
Synonym: Endopeptidase Clp
Ec: 3.4.21.92
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Clpp
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvex11
symmetry Space Group: C 1 2 1
R_factor 0.224 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
162.570 119.002 118.650 90.00 130.16 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand DIO, EDO, FME, GOL enzyme Hydrolase E.C.3.4.21.92 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, G, E, B


Primary referenceCrystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP., Kang SG, Maurizi MR, Thompson M, Mueser T, Ahvazi B, J Struct Biol 2004 Dec;148(3):338-52. PMID:15522782
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (1tg6.pdb1.gz) 216 Kb
  • Biological Unit Coordinates (1tg6.pdb2.gz) 429 Kb
  • LPC: Ligand-Protein Contacts for 1TG6
  • CSU: Contacts of Structural Units for 1TG6
  • Likely Quarternary Molecular Structure file(s) for 1TG6
  • Retrieve 1TG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TG6 from S2C, [Save to disk]
  • View 1TG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TG6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TG6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tg6_A] [1tg6] [1tg6_G] [1tg6_C] [1tg6_B] [1tg6_F] [1tg6_D] [1tg6_E]
  • SWISS-PROT database: [Q16740]
  • Domain organization of [CLPP_HUMAN] by SWISSPFAM
  • Other resources with information on 1TG6
  • Community annotation for 1TG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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