1TJC	Hydrolase	date	Jun 04, 2004
title	Crystal Structure Of Peptide-Substrate-Binding Domain Of Hum Collagen Prolyl 4-Hydroxylase
authors	M.Pekkala, R.Hieta, U.Bergmann, K.I.Kivirikko, R.K.Wierenga, J.My
compound		source
Molecule: Prolyl 4-Hydroxylase Alpha-1 Subunit Chain: A, B Fragment: Peptide-Substrate-Binding Domain Synonym: 4-Ph Alpha-1, Procollagen-Proline,2-Oxoglutarate-4 Dioxygenase Alpha-1 Subunit; Ec: 1.14.11.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: P4ha1, P4ha Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 32	R_factor 0.224 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.980 55.980 105.430 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand		enzyme	Oxidoreductase E.C.1.14.11.2 BRENDA
Primary reference	The peptide-substrate-binding domain of collagen prolyl 4-hydroxylases is a tetratricopeptide repeat domain with functional aromatic residues., Pekkala M, Hieta R, Bergmann U, Kivirikko KI, Wierenga RK, Myllyharju J, J Biol Chem 2004 Dec 10;279(50):52255-61. Epub 2004 Sep 28. PMID:15456751

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (1tjc.pdb1.gz) 32 Kb CSU: Contacts of Structural Units for 1TJC Likely Quarternary Molecular Structure file(s) for 1TJC Structure Factors (121 Kb) Retrieve 1TJC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1TJC from S2C, [Save to disk] Re-refined 1tjc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1TJC in 3D

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Visual 3D analysis of 1TJC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1TJC, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1tjca_, region A [Jmol] [rasmolscript] [script source]     - Domain d1tjcb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1tjc] [1tjc_B] [1tjc_A] SWISS-PROT database: [P13674] Domain organization of [P4HA1_HUMAN] by SWISSPFAM

Other resources with information on 1TJC

Community annotation for 1TJC at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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