1TKJ Hydrolase date Jun 08, 2004
title Streptomyces Griseus Aminopeptidase Complexed With D- Methionine
authors V.Reiland, R.Gilboa, A.Spungin-Bialik, D.Schomburg, Y.Shoham, S.Blumberg, G.Shoham
compound source
Molecule: Aminopeptidase
Chain: A
Synonym: Sgap
Ec: 3.4.11.-
 Organism_scientific: Streptomyces Griseus
Organism_taxid: 1911
Other_details: The Enzyme Is Isolated From The Commercially Available Enzyme Mixture "Pronase E".
symmetry Space Group: P 41 21 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.962 60.962 144.705 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand CA, MED, ZN enzyme Hydrolase E.C.3.4.11 BRENDA
related structures by homologous chain: 1TKF
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (1tkj.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 1TKJ
  • CSU: Contacts of Structural Units for 1TKJ
  • Likely Quarternary Molecular Structure file(s) for 1TKJ
  • Retrieve 1TKJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TKJ from S2C, [Save to disk]
    • View 1TKJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TKJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TKJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tkj_A] [1tkj]
  • SWISS-PROT database: [P80561]
  • Domain organization of [APX_STRGR] by SWISSPFAM
    • Other resources with information on 1TKJ
  • Community annotation for 1TKJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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