1TL3 Crystal structure of hiv-1 reverse transcriptase in complex with gw450557 date
authors Hopkins, A.L., Ren, J., Stuart, D.I., Stammers, D.K.
compound source
symmetry
R_factor
R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand CSD, H20, PO4 BindingDB enzyme
related structures by homologous chain: 1EET, 1IKX
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceDesign of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 1., Hopkins AL, Ren J, Milton J, Hazen RJ, Chan JH, Stuart DI, Stammers DK, J Med Chem 2004 Nov 18;47(24):5912-22. PMID:15537346
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (1tl3.pdb1.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 1TL3
  • CSU: Contacts of Structural Units for 1TL3
  • Likely Quarternary Molecular Structure file(s) for 1TL3
  • Structure Factors (209 Kb)
  • Retrieve 1TL3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TL3 from S2C, [Save to disk]
  • Re-refined 1tl3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1TL3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TL3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TL3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tl3a1, region A:430-537 [Jmol] [rasmolscript] [script source]
        - Domain d1tl3a2, region A:7-427 [Jmol] [rasmolscript] [script source]
        - Domain d1tl3b1, region B:7-427 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tl3_B] [1tl3_A] [1tl3]
  • SWISS-PROT database: [P04585]
  • Domain organization of [POL_HV1H2] by SWISSPFAM
    • Other resources with information on 1TL3
  • Community annotation for 1TL3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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