OCA Atlas for 1TL4

1TL4

Metal Transport

date

Jun 09, 2004

title

Solution Structure Of Cu(I) Hah1

authors

I.Anastassopoulou, L.Banci, I.Bertini, F.Cantini, E.Katsari, A.Ro Structural Proteomics In Europe (Spine)

compound

source

Molecule: Copper Transport Protein Atox1
Chain: A
Synonym: Metal Transport Protein Atx1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atox1, Hah1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet20b+

method

Solution NMR

ligand

CU1

enzyme

related structures

by homologous chain: 1FEE, 1TL5

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Solution structure of the apo and copper(I)-loaded human metallochaperone HAH1., Anastassopoulou I, Banci L, Bertini I, Cantini F, Katsari E, Rosato A, Biochemistry 2004 Oct 19;43(41):13046-53. PMID:15476398

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (591 Kb) [Save to disk]

Biological Unit Coordinates (1tl4.pdb1.gz) 20 Kb

LPC: Ligand-Protein Contacts for 1TL4

CSU: Contacts of Structural Units for 1TL4

Original NMR restraints for 1TL4 from PDB

Experimental data, such as chemical shifts, at BioMagResBank (BMRB)

NMR Restraints Grid from BioMagResBank (BMRB)

Retrieve 1TL4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1TL4 from S2C, [Save to disk]

View 1TL4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1TL4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 1TL4, from MSDmotif at EBI

Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1tl4a_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1tl4_A] [1tl4]

SWISS-PROT database: [O00244]

Domain organization of [ATOX1_HUMAN] by SWISSPFAM

Other resources with information on 1TL4

Community annotation for 1TL4 at PDBWiki (http://pdbwiki.org)

NMR Ensemble (OLDERADO: core, domain and representative structure database)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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