1TPE	Isomerase(Intramolecular Oxidoreductase)	date	Feb 28, 1994
title	Comparison Of The Structures And The Crystal Contacts Of Try Triosephosphate Isomerase In Four Different Crystal Forms
authors	M.E.M.Noble, K.V.Radha Kishan, J.Ph.Zeelen, R.K.Wierenga
compound		source
Molecule: Triosephosphate Isomerase Chain: A Ec: 5.3.1.1 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Brucei Organism_taxid: 5702 Strain: Brucei
symmetry	Space Group: C 1 2 1	R_factor 0.155 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.400 48.200 67.500 90.00 120.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand		enzyme	Isomerase E.C.5.3.1.1 BRENDA
related structures	by homologous chain: 1SUX, 1TPD
Gene Ontology	Chain Function Process Component A
Primary reference	Comparison of the structures and the crystal contacts of trypanosomal triosephosphate isomerase in four different crystal forms., Kishan KV, Zeelen JP, Noble ME, Borchert TV, Wierenga RK, Protein Sci 1994 May;3(5):779-87. PMID:8061607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (1tpe.pdb1.gz) 79 Kb CSU: Contacts of Structural Units for 1TPE Likely Quarternary Molecular Structure file(s) for 1TPE Retrieve 1TPE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1TPE from S2C, [Save to disk]

View 1TPE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1TPE

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1TPE, from MSDmotif at EBI Genome occurence of 1TPE's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1tpe__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1tpe] [1tpe_A] SWISS-PROT database: [P04789] Domain organization of [TPIS_TRYBB] by SWISSPFAM

Other resources with information on 1TPE

Community annotation for 1TPE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1TPE from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---