1TTX Metal Binding Protein date Jun 23, 2004
title Solution Structure Of Human Beta Parvalbumin (Oncomodulin) R With A Paramagnetism Based Strategy
authors E.Babini, I.Bertini, F.Capozzi, C.Del Bianco, D.Hollender, T.Kiss C.Luchinat, A.Quattrone, Structural Proteomics In Europe (Spi
compound source
Molecule: Oncomodulin
Chain: A
Synonym: Beta Parvalbumin, Om
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Homo Sapiens
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Xl1blue Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30xa
methodSolution NMR
ligand CA enzyme
related structures by homologous chain: 1OMD

Primary referenceSolution structure of human beta-parvalbumin and structural comparison with its paralog alpha-parvalbumin and with their rat orthologs., Babini E, Bertini I, Capozzi F, Del Bianco C, Hollender D, Kiss T, Luchinat C, Quattrone A, Biochemistry 2004 Dec 28;43(51):16076-85. PMID:15610002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (627 Kb) [Save to disk]
  • Biological Unit Coordinates (1ttx.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1TTX
  • CSU: Contacts of Structural Units for 1TTX
  • Original NMR restraints for 1TTX from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1TTX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TTX from S2C, [Save to disk]
  • View 1TTX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TTX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1TTX, from MSDmotif at EBI
  • Fold representative 1ttx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ttx_A] [1ttx]
  • SWISS-PROT database: [P0CE72]
  • Domain organization of [ONCO_HUMAN] by SWISSPFAM
  • Domain found in 1TTX: [EFh ] by SMART
  • Other resources with information on 1TTX
  • Community annotation for 1TTX at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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