1U39 Protein Transport date Jul 21, 2004
title Auto-Inhibition Mechanism Of X11smints Family Scaffold Proteins Revealed By The Closed Conformation Of The Tandem Pdz Domains
authors W.Feng, J.F.Long, L.N.Chan, C.He, A.Fu, J.Xia, N.Y.Ip, M.Zhang
compound source
Molecule: Amyloid Beta A4 Precursor Protein-Binding, Family A, Member 1;
Chain: A
Fragment: Pdz2 Domain
Synonym: X11alphamint1, Phosphotyrosine-Binding- Interacting Domain (Ptb)-Bearing Protein, Neuronal Munc18- 1-Interacting Protein 1, Neuron-Specific X11 Protein, Adaptor Protein X11alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAutoinhibition of X11/Mint scaffold proteins revealed by the closed conformation of the PDZ tandem., Long JF, Feng W, Wang R, Chan LN, Ip FC, Xia J, Ip NY, Zhang M, Nat Struct Mol Biol 2005 Jul 10;. PMID:16007100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (421 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1U39
  • Original NMR restraints for 1U39 from PDB
  • Retrieve 1U39 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U39 from S2C, [Save to disk]
  • View 1U39 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 1U39
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1U39, from MSDmotif at EBI
  • Fold representative 1u39 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u39] [1u39_A]
  • SWISS-PROT database: [Q02410]
  • Domain organization of [APBA1_HUMAN] by SWISSPFAM
  • Domain found in 1U39: [PDZ ] by SMART
  • Other resources with information on 1U39
  • Community annotation for 1U39 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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