1UA3 Hydrolase date Feb 27, 2003
title Crystal Structure Of The Pig Pancreatic A-Amylase Complexed Malto-Oligosaccharides
authors F.Payan, M.Qian
compound source
Molecule: Alpha-Amylase, Pancreatic
Chain: A
Ec: 3.2.1.1
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.781 113.183 116.924 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand BGC, CA, CL, EDO, GLC enzyme Hydrolase E.C.3.2.1.1 BRENDA
related structures by homologous chain: 1JFH, 1WO2
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the pig pancreatic alpha-amylase complexed with malto-oligosaccharides., Payan F, Qian M, J Protein Chem 2003 Apr;22(3):275-84. PMID:12962327
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (1ua3.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 1UA3
  • CSU: Contacts of Structural Units for 1UA3
  • Likely Quarternary Molecular Structure file(s) for 1UA3
  • Structure Factors (503 Kb)
  • Retrieve 1UA3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UA3 from S2C, [Save to disk]
  • Re-refined 1ua3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UA3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UA3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UA3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ua3a2, region A:1-403 [Jmol] [rasmolscript] [script source]
        - Domain d1ua3a1, region A:404-496 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ua3] [1ua3_A]
  • SWISS-PROT database: [P00690]
  • Domain organization of [AMYP_PIG] by SWISSPFAM
  • Domains found in 1UA3: [Aamy] [Aamy_C ] by SMART
  • Other resources with information on 1UA3
  • Community annotation for 1UA3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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