1UAI	Lyase	date	Mar 11, 2003
title	Crystal Structure Of The Alginate Lyase From Corynebacterium
authors	Y.Kakuta
compound		source
Molecule: Polyguluronate Lyase Chain: A Synonym: Alginate Lyase Ec: 4.2.2.11		Organism_scientific: Corynebacterium Sp. Organism_taxid: 1720
symmetry	Space Group: P 1 21 1	R_factor 0.170 R_Free 0.190
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.925 47.234 50.307 90.00 90.22 90.00
method	X-Ray Diffraction	resolution	1.20 Å
ligand		enzyme	Lyase E.C.4.2.2.11 BRENDA
note	1UAI is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the alginate (poly alpha-l-guluronate) lyase from Corynebacterium sp. at 1.2 A resolution., Osawa T, Matsubara Y, Muramatsu T, Kimura M, Kakuta Y, J Mol Biol 2005 Feb 4;345(5):1111-8. Epub 2004 Dec 13. PMID:15644208

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (1uai.pdb1.gz) 40 Kb CSU: Contacts of Structural Units for 1UAI Likely Quarternary Molecular Structure file(s) for 1UAI Structure Factors (882 Kb) Retrieve 1UAI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UAI from S2C, [Save to disk] Re-refined 1uai structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UAI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UAI

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1UAI from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UAI, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1uaia_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1uai_A] [1uai] SWISS-PROT database: [Q9RB42] Domain organization of [Q9RB42_9CORY] by SWISSPFAM

Other resources with information on 1UAI

Community annotation for 1UAI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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