OCA Atlas for 1UC6

1UC6

Protein Binding

date

Apr 08, 2003

title

Solution Structure Of The Carboxyl Terminal Domain Of The Ci Neurotrophic Factor Receptor

authors

D.Man, W.He, K.H.Sze, G.Ke, D.K.Smith, N.Y.Ip, G.Zhu

compound

source

Molecule: Ciliary Neurotrophic Factor Receptor Alpha
Chain: A
Fragment: Carboxyl Terminal Domain
Synonym: Cntf Receptor
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p1

method

Solution NMR

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Solution structure of the C-terminal domain of the ciliary neurotrophic factor (CNTF) receptor and ligand free associations among components of the CNTF receptor complex., Man D, He W, Sze KH, Gong K, Smith DK, Zhu G, Ip NY, J Biol Chem 2003 Jun 27;278(26):23285-94. PMID:12707266

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (654 Kb) [Save to disk]

Biological Unit Coordinates (1uc6.pdb1.gz) 32 Kb

CSU: Contacts of Structural Units for 1UC6

Experimental data, such as chemical shifts, at BioMagResBank (BMRB)

NMR Restraints Grid from BioMagResBank (BMRB)

Retrieve 1UC6 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1UC6 from S2C, [Save to disk]

View 1UC6 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UC6

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 1UC6, from MSDmotif at EBI

Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1uc6a_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1uc6] [1uc6_A]

SWISS-PROT database: [P26992]

Domain organization of [CNTFR_HUMAN] by SWISSPFAM

Domain found in 1UC6: [FN3 ] by SMART

Other resources with information on 1UC6

Community annotation for 1UC6 at PDBWiki (http://pdbwiki.org)

NMR Ensemble (OLDERADO: core, domain and representative structure database)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]