1UDI	Hydrolase Inhibitor	date	Oct 30, 1995
title	Nucleotide Mimicry In The Crystal Structure Of The Uracil-Dn Glycosylase-Uracil Glycosylase Inhibitor Protein Complex
authors	L.H.Pearl, R.Savva
compound		source
Molecule: Uracil-Dna Glycosylase Chain: E Ec: 3.2.2.3		Organism_scientific: Herpes Simplex Virus (Type 1 Strain Organism_taxid: 10299 Strain: 17
Molecule: Uracil-Dna Glycosylase Inhibitor Protein Chain: I Synonym: Ugi		Organism_scientific: Bacillus Phage Pbs1 Organism_taxid: 10683
symmetry	Space Group: P 65	R_factor 0.188 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 144.120 144.120 40.950 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand		enzyme	Hydrolase E.C.3.2.2.3 BRENDA
related structures	by homologous chain: 1LAU, 1LQG, 2UUG
Gene Ontology	Chain Function Process Component E I
Primary reference	Nucleotide mimicry in the crystal structure of the uracil-DNA glycosylase-uracil glycosylase inhibitor protein complex., Savva R, Pearl LH, Nat Struct Biol 1995 Sep;2(9):752-7. PMID:7552746

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (1udi.pdb1.gz) 51 Kb CSU: Contacts of Structural Units for 1UDI Likely Quarternary Molecular Structure file(s) for 1UDI Retrieve 1UDI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UDI from S2C, [Save to disk]

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Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UDI

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UDI, from MSDmotif at EBI Genome occurence of 1UDI's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1udie_, region E [Jmol] [rasmolscript] [script source]     - Domain d1udii_, region I [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1udi_I] [1udi] [1udi_E] SWISS-PROT database: [P14739] [P10186] Domain organization of [UNGI_BPPB2] [UNG_HHV11] by SWISSPFAM Domains found in 1UDI: [UDG] [UreE_C ] by SMART

Other resources with information on 1UDI

Community annotation for 1UDI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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