1UEG Structural Protein date May 14, 2003
title Crystal Structure Of Amino-Terminal Microtubule Binding Doma
authors I.Hayashi, M.Ikura
compound source
Molecule: Microtubule-Associated Protein Rpeb Family Membe
Chain: A
Fragment: N-Terminal Domain, Eb1 Microtubule-Binding Domain
Synonym: Apc-Binding Protein Eb1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eb1 (Amino Acids 1-130)
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 43 21 2
R_factor 0.223 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.589 48.589 90.301 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand SO4 enzyme
related structures by homologous chain: 1V5K, 1VKA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the amino-terminal microtubule-binding domain of end-binding protein 1 (EB1)., Hayashi I, Ikura M, J Biol Chem 2003 Sep 19;278(38):36430-4. Epub 2003 Jul 11. PMID:12857735
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (1ueg.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 1UEG
  • CSU: Contacts of Structural Units for 1UEG
  • Likely Quarternary Molecular Structure file(s) for 1UEG
  • Structure Factors (50 Kb)
  • Retrieve 1UEG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UEG from S2C, [Save to disk]
  • Re-refined 1ueg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UEG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UEG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UEG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uega_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ueg_A] [1ueg]
  • SWISS-PROT database: [Q15691]
  • Domain organization of [MARE1_HUMAN] by SWISSPFAM
  • Other resources with information on 1UEG
  • Community annotation for 1UEG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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