1UEJ Transferase date May 16, 2003
title Crystal Structure Of Human Uridine-Cytidine Kinase 2 Complex Substrate, Cytidine
authors N.N.Suzuki, K.Koizumi, M.Fukushima, A.Matsuda, F.Inagaki
compound source
Molecule: Uridine-Cytidine Kinase 2
Chain: A, B
Fragment: Residues 1-250
Synonym: Uridine-Cytidine Kinase
Ec: 2.7.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p
symmetry Space Group: F 2 2 2
R_factor 0.213 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
138.296 247.631 90.944 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.61 Å
ligand CIT, CTN enzyme Transferase E.C.2.7.1.48 BRENDA
related structures by homologous chain: 1UDW
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for the specificity, catalysis, and regulation of human uridine-cytidine kinase., Suzuki NN, Koizumi K, Fukushima M, Matsuda A, Inagaki F, Structure (Camb) 2004 May;12(5):751-64. PMID:15130468
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1uej.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (1uej.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 1UEJ
  • CSU: Contacts of Structural Units for 1UEJ
  • Likely Quarternary Molecular Structure file(s) for 1UEJ
  • Structure Factors (195 Kb)
  • Retrieve 1UEJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UEJ from S2C, [Save to disk]
  • Re-refined 1uej structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UEJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UEJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UEJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ueja_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1uejb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uej_A] [1uej] [1uej_B]
  • SWISS-PROT database: [Q9BZX2]
  • Domain organization of [UCK2_HUMAN] by SWISSPFAM
  • Other resources with information on 1UEJ
  • Community annotation for 1UEJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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