1UF1 Protein Binding date May 22, 2003
title Solution Structure Of The Second Pdz Domain Of Human Kiaa152
authors K.Saito, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Structur Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Kiaa1526 Protein
Chain: A
Fragment: Pdz Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kazusa Cdna Fj04743
Expression_system_vector_type: Plasimid
Expression_system_plasmid: P021030-47
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (619 Kb) [Save to disk]
  • Biological Unit Coordinates (1uf1.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 1UF1
  • Retrieve 1UF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UF1 from S2C, [Save to disk]
  • View 1UF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UF1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UF1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uf1a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uf1] [1uf1_A]
  • SWISS-PROT database: [Q9P202]
  • Domain organization of [WHRN_HUMAN] by SWISSPFAM
  • Domain found in 1UF1: [PDZ ] by SMART
  • Other resources with information on 1UF1
  • Community annotation for 1UF1 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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