1UFF Endocytosis Exocytosis date May 29, 2003
title Solution Structure Of The First Sh3 Domain Of Human Intersectin2 (Kiaa1256)
authors N.Kobayashi, T.Kigawa, S.Koshiba, N.Tochio, M.Inoue, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Intersectin 2
Chain: A
Fragment: Sh3 Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kazusa Cdna Hh15293
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P021015-27
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (461 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1UFF
  • Retrieve 1UFF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UFF from S2C, [Save to disk]
  • View 1UFF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UFF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UFF, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uffa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1uff from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uff_A] [1uff]
  • SWISS-PROT database: [Q9NZM3]
  • Domain organization of [ITSN2_HUMAN] by SWISSPFAM
  • Domain found in 1UFF: [SH3 ] by SMART
  • Other resources with information on 1UFF
  • Community annotation for 1UFF at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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