1UG1 Structural Genomics, Unknown Function date Jun 11, 2003
title Sh3 Domain Of Hypothetical Protein Baa76854.1
authors T.Nagata, Y.Muto, Y.Kamewari, M.Shirouzu, T.Terada, T.Kigawa, M.In T.Yabuki, M.Aoki, E.Seki, T.Matsuda, H.Hirota, M.Yoshida, N.Kobay A.Tanaka, T.Osanai, Y.Matsuo, O.Ohara, T.Nagase, R.Kikuno, M.Naka S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Kiaa1010 Protein
Chain: A
Fragment: Sh3 Domain
Synonym: Hypothetical Protein Baa76854.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kazusa Cdna Hj05262
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P021015-49
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (446 Kb) [Save to disk]
  • Biological Unit Coordinates (1ug1.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 1UG1
  • Retrieve 1UG1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UG1 from S2C, [Save to disk]
    • View 1UG1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UG1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UG1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ug1a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ug1] [1ug1_A]
  • SWISS-PROT database: [Q6XZF7]
  • Domain organization of [DNMBP_HUMAN] by SWISSPFAM
  • Domain found in 1UG1: [SH3 ] by SMART
    • Other resources with information on 1UG1
  • Community annotation for 1UG1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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