1UG6	Hydrolase	date	Jun 12, 2003
title	Structure Of Beta-Glucosidase At Atomic Resolution From Ther Thermophilus Hb8
authors	N.K.Lokanath, I.Shiromizu, M.Miyano, S.Yokoyama, S.Kuramitsu, N.K Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Beta-Glycosidase Chain: A Synonym: Beta-Glucosidase Protein Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 274 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11a
symmetry	Space Group: C 2 2 21	R_factor 0.121 R_Free 0.130
crystal cell	length a length b length c angle alpha angle beta angle gamma 109.092 116.463 87.362 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	0.99 Å
ligand	GOL	enzyme
note	1UG6 is a representative structure and supersedes 1UAH
related structures	by homologous chain: 1NP2
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk] Biological Unit Coordinates (1ug6.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 1UG6 CSU: Contacts of Structural Units for 1UG6 Likely Quarternary Molecular Structure file(s) for 1UG6 Structure Factors (2465 Kb) Retrieve 1UG6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UG6 from S2C, [Save to disk] Re-refined 1ug6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UG6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UG6

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1UG6 from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UG6, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ug6a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ug6_A] [1ug6] SWISS-PROT database: [Q8GEB3] Domain organization of [Q8GEB3_THETH] by SWISSPFAM

Other resources with information on 1UG6

Community annotation for 1UG6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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