1UI7 Oxidoreductase date Jul 15, 2003
title Site-Directed Mutagenesis Of His433 Involved In Binding Of C In Arthrobacter Globiformis Amine Oxidase
authors H.Matsunami, T.Okajima, S.Hirota, H.Yamaguchi, H.Hori, S.Kuroda, K
compound source
Molecule: Phenylethylamine Oxidase
Chain: A, B
Synonym: Copper Amine Oxidase
Ec: 1.4.3.6
Engineered: Yes
Mutation: Yes
Organism_scientific: Arthrobacter Globiformis
Organism_taxid: 1665
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Cd03
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pepo-02
symmetry Space Group: I 1 2 1
R_factor 0.206 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
156.510 63.320 185.212 90.00 111.50 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CU enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
related structures by homologous chain: 1IQX, 1IVU
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceChemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor., Matsunami H, Okajima T, Hirota S, Yamaguchi H, Hori H, Kuroda S, Tanizawa K, Biochemistry 2004 Mar 2;43(8):2178-87. PMID:14979714
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]
  • Biological Unit Coordinates (1ui7.pdb1.gz) 208 Kb
  • LPC: Ligand-Protein Contacts for 1UI7
  • CSU: Contacts of Structural Units for 1UI7
  • Likely Quarternary Molecular Structure file(s) for 1UI7
  • Structure Factors (996 Kb)
  • Retrieve 1UI7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UI7 from S2C, [Save to disk]
  • Re-refined 1ui7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UI7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UI7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UI7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ui7a1, region A:212-628 [Jmol] [rasmolscript] [script source]
        - Domain d1ui7a2, region A:9-96 [Jmol] [rasmolscript] [script source]
        - Domain d1ui7a3, region A:97-211 [Jmol] [rasmolscript] [script source]
        - Domain d1ui7b1, region B:212-628 [Jmol] [rasmolscript] [script source]
        - Domain d1ui7b2, region B:9-96 [Jmol] [rasmolscript] [script source]
        - Domain d1ui7b3, region B:97-211 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ui7] [1ui7_A] [1ui7_B]
  • SWISS-PROT database: [P46881]
  • Domain organization of [PAOX_ARTGO] by SWISSPFAM
  • Other resources with information on 1UI7
  • Community annotation for 1UI7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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