1UNJ Dna Antibiotic date Sep 10, 2003
title Crystal Structure Of A 7-Aminoactinomycin D Complex With Non Complementary Dna
authors E.C.Alexopoulos, R.Klement, E.A.Jares-Erijman, I.Uson, T.M.Jovin G.M.Sheldrick
compound source
Molecule: 5'-D(Tptpapgpbrutp)-3'
Chain: A, B, C, D, G, H, I, J, M, N, O, P, S, T, U, V
Engineered: Yes
 Synthetic: Yes

Molecule: 7-Amino-Actinomycin D
Chain: E, F, K, L, Q, R, W, X
Synonym: Dactinomycin
Engineered: Yes
Synthetic: Yes
Organism_scientific: Streptomyces Antibioticus
Organism_taxid: 1890
symmetry Space Group: P 32 2 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.222 71.222 108.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand BRU, DVA, MVA, PX1, SAR enzyme
Primary referenceCrystal and solution structures of 7-amino-actinomycin D complexes with d(TTAGBrUT), d(TTAGTT) and d(TTTAGTTT)., Alexopoulos E, Jares-Erijman EA, Jovin TM, Klement R, Machinek R, Sheldrick GM, Uson I, Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):407-15. Epub 2005, Mar 24. PMID:15805595
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1unj.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (1unj.pdb2.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 1UNJ
  • CSU: Contacts of Structural Units for 1UNJ
  • Likely Quarternary Molecular Structure file(s) for 1UNJ
  • Structure Factors (99 Kb)
  • Retrieve 1UNJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UNJ from S2C, [Save to disk]
  • Re-refined 1unj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1UNJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UNJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UNJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1unj_S] [1unj_V] [1unj_T] [1unj_I] [1unj_F] [1unj] [1unj_Q] [1unj_R] [1unj_A] [1unj_E] [1unj_B] [1unj_O] [1unj_N] [1unj_K] [1unj_M] [1unj_H] [1unj_P] [1unj_G] [1unj_W] [1unj_C] [1unj_U] [1unj_J] [1unj_L] [1unj_D] [1unj_X]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1UNJ
  • Community annotation for 1UNJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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