1UOM Nuclear Protein date Apr 11, 2003
title The Structure Of Estrogen Receptor In Complex With A Selecti Potent Tetrahydroisochiolin Ligand.
authors W.Stark, S.F.Bischoff, T.Buhl, B.Fournier, C.Halleux, J.Kallen, H. J.Renaud
compound source
Molecule: Estrogen Receptor
Chain: A
Fragment: Ligand Binding Domain, Residues 301 - 553
Synonym: Estrogen Receptor Alpha, Er, Estradiol Receptor, E Esr1, Nr3a1, Esr;
Engineered: Yes
Mutation: Yes
Other_details: Nvp-Add562 L Solvent S
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet26b
symmetry Space Group: P 65 2 2
R_factor 0.235 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.200 58.200 274.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.28 Å
ligand PTI BindingDB enzyme
related structures by homologous chain: 1GWR, 1QKT
Primary referenceEstrogen receptor modulators: identification and structure-activity relationships of potent ERalpha-selective tetrahydroisoquinoline ligands., Renaud J, Bischoff SF, Buhl T, Floersheim P, Fournier B, Halleux C, Kallen J, Keller H, Schlaeppi JM, Stark W, J Med Chem 2003 Jul 3;46(14):2945-57. PMID:12825935
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1uom.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 1UOM
  • CSU: Contacts of Structural Units for 1UOM
  • Likely Quarternary Molecular Structure file(s) for 1UOM
  • Structure Factors (80 Kb)
  • Retrieve 1UOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UOM from S2C, [Save to disk]
  • Re-refined 1uom structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UOM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UOM, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uoma_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uom] [1uom_A]
  • SWISS-PROT database: [P03372]
  • Domain organization of [ESR1_HUMAN] by SWISSPFAM
  • Domain found in 1UOM: [HOLI ] by SMART
  • Other resources with information on 1UOM
  • Community annotation for 1UOM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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