1URF Transferase date Oct 29, 2003
title Hr1b Domain From Prk1
authors D.Owen, P.N.Lowe, D.Nietlispach, C.E.Brosnan, D.Y.Chirgadze, P.J.Parker, T.L.Blundell, H.R.Mott
compound source
Molecule: Protein Kinase C-Like 1
Chain: A
Fragment: Hr1b, Residues 122-199
Synonym: Plk1_human, Protein-Kinase C-Related Kinase 1, Protein Kinase C-Like Pkn, Serine-Threonine Protein Kinase N;
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pgex-3x
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular dissection of the interaction between the small G proteins Rac1 and RhoA and protein kinase C-related kinase 1 (PRK1)., Owen D, Lowe PN, Nietlispach D, Brosnan CE, Chirgadze DY, Parker PJ, Blundell TL, Mott HR, J Biol Chem 2003 Dec 12;278(50):50578-87. Epub 2003 Sep 26. PMID:14514689
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (501 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1URF
  • Retrieve 1URF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1URF from S2C, [Save to disk]
  • View 1URF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1URF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1URF, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1urfa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1urf] [1urf_A]
  • SWISS-PROT database: [Q16512]
  • Domain organization of [PKN1_HUMAN] by SWISSPFAM
  • Domain found in 1URF: [Hr1 ] by SMART
  • Other resources with information on 1URF
  • Community annotation for 1URF at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science