1USZ Adhesin date Dec 02, 2003
title Semet Afae-3 Adhesin From Escherichia Coli
authors K.L.Anderson, J.Billington, D.Pettigrew, E.Cota, P.Roversi, P.Simpson, H.A.Chen, P.Urvil, L.Dumerle, P.Barlow, E.Medof, R.A.G.Smith, B.Nowicki, C.Le Bouguenec, S.M.Lea, S.Matthews
compound source
Molecule: Afimbrial Adhesin Afa-III
Chain: A
Synonym: Afae3
Engineered: Yes
Mutation: Yes
Other_details: Selenomethionine Derivative
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: A30
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834
Expression_system_plasmid: Pqe-30
Other_details: N-Terminus 6-His-Tagged
symmetry Space Group: I 4 3 2
R_factor 0.218 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.300 141.300 141.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.28 Å
ligand CL, MSE, SO4 enzyme
Primary referenceHigh resolution studies of the Afa/Dr adhesin DraE and its interaction with chloramphenicol., Pettigrew D, Anderson KL, Billington J, Cota E, Simpson P, Urvil P, Rabuzin F, Roversi P, Nowicki B, du Merle L, Le Bouguenec C, Matthews S, Lea SM, J Biol Chem. 2004 Nov 5;279(45):46851-7. Epub 2004 Aug 24. PMID:15331605
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (1usz.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 1USZ
  • CSU: Contacts of Structural Units for 1USZ
  • Likely Quarternary Molecular Structure file(s) for 1USZ
  • Structure Factors (43 Kb)
  • Retrieve 1USZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1USZ from S2C, [Save to disk]
  • Re-refined 1usz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1USZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1USZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1USZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1usza_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1usz] [1usz_A]
  • SWISS-PROT database: [Q57254]
  • Domain organization of [AFAE3_ECOLX] by SWISSPFAM
    • Other resources with information on 1USZ
  • Community annotation for 1USZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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