1UTJ	Hydrolase	date	Dec 09, 2003
title	Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements
authors	H.K.S.Leiros, B.O.Brandsdal, O.A.Andersen, V.Os, I.Leiros, R.Hel J.Otlewski, N.P.Willassen, A.O.Smalas
compound		source
Molecule: Trypsin I Chain: A Ec: 3.4.21.4		Organism_scientific: Salmo Salar Organism_common: Atlantic Salmon Organism_taxid: 8030 Organ: Pyloric Caeca
symmetry	Space Group: P 21 21 21	R_factor 0.162 R_Free 0.207
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.030 48.180 83.010 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.83 Å
ligand	ABN, CA	enzyme	Hydrolase E.C.3.4.21.4 BRENDA
related structures	by homologous chain: 1BIT, 1ZR0
Gene Ontology	Chain Function Process Component A
Primary reference	Trypsin specificity as elucidated by LIE calculations, X-ray structures, and association constant measurements., Leiros HK, Brandsdal BO, Andersen OA, Os V, Leiros I, Helland R, Otlewski J, Willassen NP, Smalas AO, Protein Sci 2004 Apr;13(4):1056-70. PMID:15044735

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (1utj.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 1UTJ CSU: Contacts of Structural Units for 1UTJ Likely Quarternary Molecular Structure file(s) for 1UTJ Structure Factors (113 Kb) Retrieve 1UTJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UTJ from S2C, [Save to disk] Re-refined 1utj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UTJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UTJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UTJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1utja_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1utj_A] [1utj] SWISS-PROT database: [P35031] Domain organization of [TRY1_SALSA] by SWISSPFAM Domain found in 1UTJ: [Tryp_SPc ] by SMART

Other resources with information on 1UTJ

Community annotation for 1UTJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---