1UTU Chromatin Regulator date Dec 10, 2003
title Crystal Structure Of Novel Protein Emsy Truncate
authors G.B.Chavali, B.P.Basu, A.J.Doherty
compound source
Molecule: Emsy
Chain: A, B
Fragment: Residues 1-108
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.207 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.178 32.642 51.607 90.00 92.51 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceBinding of EMSY to HP1beta: implications for recruitment of HP1beta and BS69., Ekblad CM, Chavali GB, Basu BP, Freund SM, Veprintsev D, Hughes-Davies L, Kouzarides T, Doherty AJ, Itzhaki LS, EMBO Rep. 2005 Jul;6(7):675-80. PMID:15947784
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1utu.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 1UTU
  • Likely Quarternary Molecular Structure file(s) for 1UTU
  • Structure Factors (77 Kb)
  • Retrieve 1UTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UTU from S2C, [Save to disk]
  • Re-refined 1utu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UTU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UTU, from MSDmotif at EBI
  • Fold representative 1utu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1utu_B] [1utu] [1utu_A]
  • SWISS-PROT database: [Q7Z589]
  • Domain organization of [EMSY_HUMAN] by SWISSPFAM
  • Domain found in 1UTU: [ENT ] by SMART
  • Other resources with information on 1UTU
  • Community annotation for 1UTU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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